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The other tipoff was code like this:
        while ($array_ref = shift (@md5_LoL))
        {
            push @fc_LoL, compare_by_fc (@$array_ref);
        }
Why modify @md5_LoL?
It's just one more state change the maintenance programmer has to worry about
But it makes sense...
If it was written by someone uncomfortable with garbage collection
Perhaps:
        foreach my $array_ref (@md5_LoL) 
        {
            push @fc_LoL, compare_by_fc (@$array_ref);
        }
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